BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006D12SP1|AL425537
(937 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig524 1742 0.0
>3x_Contig524
Length = 2067
Score = 1742 bits (870), Expect = 0.0
Identities = 922/942 (97%), Gaps = 5/942 (0%)
Strand = Plus / Minus
Query: 1 gtgcatcgagttgatattccctcgccttggggttgtcatcattccaagattattttctcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1888 gtgcatcgagttgatattccctcgccttggggttgtcatcattccaagattattttctcg 1829
Query: 61 tttcatcaaaatgggacgatgagaatgcatgtvccgtcatttaatctatctcgtgaagag 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1828 tttcatcaaaatgggacgatgagaatgcatgtaccgtcatttaatctatctcgtgaagag 1769
Query: 121 atgaacttggttcagcagacagtatggacctcacccctgttatacgagaagtcagamaca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1768 atgaacttggttcagcagacagtatggacctcacccctgttatacgagaagtcagaaaca 1709
Query: 181 gtaccgaaaaagaaatcccggtttgaggacgaattattggagtaccttaattcgtactca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1708 gtaccgaaaaagaaatcccggtttgaggacgaattattggagtaccttaattcgtactca 1649
Query: 241 tcgtatacgtcattatatggtttgattgcmtctttaaagcggtacaaatggcatgtcttg 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1648 tcgtatacgtcattatatggtttgattgcatctttaaagcggtacaaatggcatgtcttg 1589
Query: 301 gacgaacaaaattgtcaatttgtgtactcaaccccatatmacggtggtttgacacaattg 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1588 gacgaacaaaattgtcaatttgtgtactcaaccccatataacggtggtttgacacaattg 1529
Query: 361 aagtcgtgtttgagagcatctggtatgavattgcatggcgatgaagaagatgatgatctt 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1528 aagtcgtgtttgagagcatctggtatgaaattgcatggcgatgaagaagatgatgatctt 1469
Query: 421 tcatttgtaaatcttttcatacaggtaagtyctatggggaa-ccattcagaaaammattc 479
|||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||
Sbjct: 1468 tcatttgtaaatcttttcatacaggtaagttctatggggaacccattcagaaaaaaattc 1409
Query: 480 gatctcctacaggacgttatgataccgtacttatacaccgattggttcgamaaggatggg 539
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1408 gatctcctacaggacgttatgataccgtacttatacaccgattggttcgaaaaggatggg 1349
Query: 540 tacgataaamvmttgacatccaaggaatatacgacaccgttcctagcgcactcgacattg 599
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1348 tacgataaaaaattgaaatccaaggaatatacgacaccgttcctagcgcactcgacattg 1289
Query: 600 gtatggcctactaamaccgagatcaaagagtgtatgacacaggggctaagtgcaaattgg 659
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1288 gtatggcctactaaaaccgagatcaaagagtgtatgacacaggggctaagtgcaaattgg 1229
Query: 660 tttttttacaaaagatcagaacaaactgagaggaaagtagtgccttgtttaagaaaacat 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1228 tttttttacaaaagatcagaacaaactgagaggaaagtagtgccttgtttaagaaaacat 1169
Query: 720 gtccctctgccaacaaacgcgacacagtccgataagaataggcatatggttccaagccat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1168 gtccctctgccaacaaacgcgacacagtccgataagaataggcatatggttccaagccat 1109
Query: 780 accaaatattatatacaattcacagatgaaaatacactcaagcgaccagattggatacta 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 accaaatattatatacaattcacagatgaaaatacactcaagcgaccagattggatacta 1049
Query: 840 ctcaccagtcataacctttcccaagctgcatggggt-ccagcccact-aaaaaacctacc 897
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 1048 ctcaccagtcataacctttcccaagctgcatggggtcccagcccactaaaaaaacctacc 989
Query: 898 aattacgaatgcggtattctat-cmcgac-accatggggaga 937
|||||||||||||||||||||| | |||| ||||||||||||
Sbjct: 988 aattacgaatgcggtattctatacacgacaaccatggggaga 947
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5826
Number of Sequences: 1807
Number of extensions: 5826
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 937
length of database: 10,358,551
effective HSP length: 16
effective length of query: 921
effective length of database: 10,329,639
effective search space: 9513597519
effective search space used: 9513597519
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)